Tiled and layer-adaptive three-dimensional structured illumination microscopy based on principal component analysis

Weiyi Xia*, Jiaming Qian, Pengfei Fan, Chao Zuo

*Corresponding author for this work

Research output: Chapter in Book or Report/Conference proceedingConference Proceedingpeer-review

Abstract

Three-dimensional (3D) Structured illumination microscopy (SIM) has become one of the most commonly implemented fluorescence super-resolution modes in life sciences due to its unique advantages of wide field of view, fast imaging, and weak phototoxicity and photobleaching. However, the traditional two-dimensional (2D) SIM suffers from the”missing cone” problem, which makes it impossible to realize true three-dimensional (3D) imaging. In order to solve this problem, 3D SIM has been developed to achieve twice the resolution in both lateral and axial directions. Recently, we propose a tiled and layer-adaptive 3D SIM based on principal component analysis (PCA) to solve the computational complexity and time-consuming, local perturbation of illumination parameters, and microscope moving mechanical errors faced by 3D SIM in parameter estimation. The algorithm accelerates and improves the accuracy of transverse and axial illumination parameters, which is expected to achieve fast, iteration-free, high-precision, high-quality 3D SIM super-resolution imaging.

Original languageEnglish
Title of host publicationSixth Conference on Frontiers in Optical Imaging and Technology
Subtitle of host publicationNovel Imaging Systems
EditorsYan Zhou, Qiang Zhang, Feihu Xu, Bo Liu
PublisherSPIE
ISBN (Electronic)9781510679702
DOIs
Publication statusPublished - 2024
Event6th Conference on Frontiers in Optical Imaging and Technology: Novel Imaging Systems - Nanjing, China
Duration: 22 Oct 202324 Oct 2023

Publication series

NameProceedings of SPIE - The International Society for Optical Engineering
Volume13155
ISSN (Print)0277-786X
ISSN (Electronic)1996-756X

Conference

Conference6th Conference on Frontiers in Optical Imaging and Technology: Novel Imaging Systems
Country/TerritoryChina
CityNanjing
Period22/10/2324/10/23

Keywords

  • 3D SIM
  • layer-adaptive
  • parameter estimation
  • principal component analysis
  • tiled reconstruction

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