Skip to main navigation Skip to search Skip to main content

NGS-based high-throughput screen to identify MicroRNAs regulating growth of B-cell lymphoma

  • Joost Kluiver*
  • , Fubiao Niu
  • , Ye Yuan
  • , Klaas Kok
  • , Anke van den Berg
  • , Agnieszka Dzikiewicz-Krawczyk
  • *Corresponding author for this work
  • University of Groningen
  • Harbin Medical University
  • Institute of Human Genetics of the Polish Academy of Sciences

Research output: Chapter in Book or Report/Conference proceedingChapterpeer-review

4 Citations (Scopus)

Abstract

MicroRNAs (miRNAs) play important roles in development, differentiation, and homeostasis by regulating protein translation. In B-cell lymphoma, many miRNAs have altered expression levels, and for a limited subset of them, experimental data supports their functional relevance in lymphoma pathogenesis. This chapter describes an unbiased next-generation sequencing (NGS)-based high-throughput screening approach to identify miRNAs that are involved in the control of cell growth. First, we provide a protocol for performing high-throughput screening for miRNA inhibition and overexpression. Second, we describe the procedure for next-generation sequencing library preparation. Third, we provide a workflow for data analysis.

Original languageEnglish
Title of host publicationMethods in Molecular Biology
PublisherHumana Press Inc.
Pages269-282
Number of pages14
DOIs
Publication statusPublished - 2019
Externally publishedYes

Publication series

NameMethods in Molecular Biology
Volume1956
ISSN (Print)1064-3745

Keywords

  • B-cell lymphoma
  • Cell growth
  • High-throughput screen
  • MiRNA inhibition
  • MiRNA overexpression
  • MicroRNA

Fingerprint

Dive into the research topics of 'NGS-based high-throughput screen to identify MicroRNAs regulating growth of B-cell lymphoma'. Together they form a unique fingerprint.

Cite this