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Deep Learning Segmentation of the Right Ventricle in Cardiac MRI: The M&Ms Challenge

  • Carlos Martin-Isla*
  • , Victor M. Campello
  • , Cristian Izquierdo
  • , Kaisar Kushibar
  • , Carla Sendra-Balcells
  • , Polyxeni Gkontra
  • , Alireza Sojoudi
  • , Mitchell J. Fulton
  • , Tewodros Weldebirhan Arega
  • , Kumaradevan Punithakumar
  • , Lei Li
  • , Xiaowu Sun
  • , Yasmina Al Khalil
  • , Di Liu
  • , Sana Jabbar
  • , Sandro Queiros
  • , Francesco Galati
  • , Moona Mazher
  • , Zheyao Gao
  • , Marcel Beetz
  • Lennart Tautz, Christoforos Galazis, Marta Varela, Markus Hullebrand, Vicente Grau, Xiahai Zhuang, Domenec Puig, Maria A. Zuluaga, Hassan Mohy-Ud-Din, Dimitris Metaxas, Marcel Breeuwer, Rob J. Van Der Geest, Michelle Noga, Stephanie Bricq, Mark E. Rentschler, Andrea Guala, Steffen E. Petersen, Sergio Escalera, Jose F.Rodriguez Palomares, Karim Lekadir
*Corresponding author for this work
  • University of Barcelona
  • Circle Cardiovascular Imaging Inc.
  • University of Colorado Boulder
  • University of Burgundy
  • University of Alberta
  • Alberta Health Services
  • Fudan University
  • Leiden University
  • Eindhoven University of Technology
  • Rutgers - The State University of New Jersey, New Brunswick
  • Lahore University of Management Sciences
  • University of Minho
  • Eurecom Institute
  • Universidad Rovira i Virgili
  • University of Oxford
  • Charité – Universitätsmedizin Berlin
  • Fraunhofer Institute for Digital Medicine
  • Imperial College London
  • Vall d'Hebron Research Institute
  • Barts Health NHS Trust
  • Queen Mary University of London
  • Autonomous University of Barcelona

Research output: Contribution to journalArticlepeer-review

68 Citations (Scopus)

Abstract

In recent years, several deep learning models have been proposed to accurately quantify and diagnose cardiac pathologies. These automated tools heavily rely on the accurate segmentation of cardiac structures in MRI images. However, segmentation of the right ventricle is challenging due to its highly complex shape and ill-defined borders. Hence, there is a need for new methods to handle such structure's geometrical and textural complexities, notably in the presence of pathologies such as Dilated Right Ventricle, Tricuspid Regurgitation, Arrhythmogenesis, Tetralogy of Fallot, and Inter-atrial Communication. The last MICCAI challenge on right ventricle segmentation was held in 2012 and included only 48 cases from a single clinical center. As part of the 12th Workshop on Statistical Atlases and Computational Models of the Heart (STACOM 2021), the M&Ms-2 challenge was organized to promote the interest of the research community around right ventricle segmentation in multi-disease, multi-view, and multi-center cardiac MRI. Three hundred sixty CMR cases, including short-axis and long-axis 4-chamber views, were collected from three Spanish hospitals using nine different scanners from three different vendors, and included a diverse set of right and left ventricle pathologies. The solutions provided by the participants show that nnU-Net achieved the best results overall. However, multi-view approaches were able to capture additional information, highlighting the need to integrate multiple cardiac diseases, views, scanners, and acquisition protocols to produce reliable automatic cardiac segmentation algorithms.

Original languageEnglish
Pages (from-to)3302-3313
Number of pages12
JournalIEEE Journal of Biomedical and Health Informatics
Volume27
Issue number7
DOIs
Publication statusPublished - 1 Jul 2023
Externally publishedYes

Keywords

  • Cardiovascular magnetic resonance
  • data augmentation
  • image segmentation
  • multi-view segmentation
  • public dataset

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