Deconstructing adult zebrafish behavior with swim trace visualizations

Jonathan M. Cachat; Adam Stewart; Eli Utterback; Evan Kyzar; Peter C. Hart; Dillon Carlos; Siddharth Gaikwad; Molly Hook; Kathryn Rhymes; Allan V. Kalueff

doi:10.1007/978-1-60761-953-6_16

Deconstructing adult zebrafish behavior with swim trace visualizations

Jonathan M. Cachat
, Adam Stewart
, Eli Utterback
, Evan Kyzar
, Peter C. Hart
, Dillon Carlos
, Siddharth Gaikwad
, Molly Hook
, Kathryn Rhymes
, Allan V. Kalueff

Research output: Chapter in Book or Report/Conference proceeding › Chapter › peer-review

17 Citations (Scopus)

Abstract

Three-dimensional reconstruction is a method of qualifying the behavioral activity of several animals including mice, rats, and zebrafish. This method allows for measuring behavioral endpoint data on two types of tracking planes (temporal and spatial). Temporal tracking measures the activity of a subject across time while spatial tracking measures the activity of a subject in a specific area of the experimental arena as such. Data representation over 3D visual trajectory reconstruction is a robustly advantageous method of behavioral phenotyping. Digital video-tracking and analysis eliminates the inaccuracies of manual tracking and allows for improved investigation of behavioral activity at specific points in time or specific areas of the tracking arena.

Original language	English
Title of host publication	Zebrafish Neurobehavioral Protocols
Editors	Allan Kalueff, Jonathan Cachat
Pages	191-201
Number of pages	11
DOIs	https://doi.org/10.1007/978-1-60761-953-6_16
Publication status	Published - 2011
Externally published	Yes

Publication series

Name	Neuromethods
Volume	51
ISSN (Print)	0893-2336
ISSN (Electronic)	1940-6045

UN SDGs

This output contributes to the following UN Sustainable Development Goals (SDGs)

SDG 3 Good Health and Well-being

Keywords

3D reconstruction
affective behaviors
behavioral endpoints
novel tank test
video-tracking technology
Zebrafish

Access to Document

10.1007/978-1-60761-953-6_16

Cite this

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title = "Deconstructing adult zebrafish behavior with swim trace visualizations",

abstract = "Three-dimensional reconstruction is a method of qualifying the behavioral activity of several animals including mice, rats, and zebrafish. This method allows for measuring behavioral endpoint data on two types of tracking planes (temporal and spatial). Temporal tracking measures the activity of a subject across time while spatial tracking measures the activity of a subject in a specific area of the experimental arena as such. Data representation over 3D visual trajectory reconstruction is a robustly advantageous method of behavioral phenotyping. Digital video-tracking and analysis eliminates the inaccuracies of manual tracking and allows for improved investigation of behavioral activity at specific points in time or specific areas of the tracking arena.",

keywords = "3D reconstruction, affective behaviors, behavioral endpoints, novel tank test, video-tracking technology, Zebrafish",

author = "Cachat, \{Jonathan M.\} and Adam Stewart and Eli Utterback and Evan Kyzar and Hart, \{Peter C.\} and Dillon Carlos and Siddharth Gaikwad and Molly Hook and Kathryn Rhymes and Kalueff, \{Allan V.\}",

year = "2011",

doi = "10.1007/978-1-60761-953-6\_16",

language = "English",

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T1 - Deconstructing adult zebrafish behavior with swim trace visualizations

AU - Cachat, Jonathan M.

AU - Stewart, Adam

AU - Utterback, Eli

AU - Kyzar, Evan

AU - Hart, Peter C.

AU - Carlos, Dillon

AU - Gaikwad, Siddharth

AU - Hook, Molly

AU - Rhymes, Kathryn

AU - Kalueff, Allan V.

PY - 2011

Y1 - 2011

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AB - Three-dimensional reconstruction is a method of qualifying the behavioral activity of several animals including mice, rats, and zebrafish. This method allows for measuring behavioral endpoint data on two types of tracking planes (temporal and spatial). Temporal tracking measures the activity of a subject across time while spatial tracking measures the activity of a subject in a specific area of the experimental arena as such. Data representation over 3D visual trajectory reconstruction is a robustly advantageous method of behavioral phenotyping. Digital video-tracking and analysis eliminates the inaccuracies of manual tracking and allows for improved investigation of behavioral activity at specific points in time or specific areas of the tracking arena.

KW - 3D reconstruction

KW - affective behaviors

KW - behavioral endpoints

KW - novel tank test

KW - video-tracking technology

KW - Zebrafish

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DO - 10.1007/978-1-60761-953-6_16

M3 - Chapter

AN - SCOPUS:78149328734

SN - 9781607619529

T3 - Neuromethods

SP - 191

EP - 201

BT - Zebrafish Neurobehavioral Protocols

A2 - Kalueff, Allan

A2 - Cachat, Jonathan

ER -

Deconstructing adult zebrafish behavior with swim trace visualizations

Abstract

Publication series

UN SDGs

Keywords

Access to Document

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