Personal profile
Personal profile
Research Interests
My research interests includes, but not limited to, reduced-order modelling, Gaussian process and kernel methods, physics-informed machine learning.
Short Bio
I worked as a postdoctoral researcher in Mathematics of Imaging & AI group at University of Twente under the guidance of Prof. Mengwu Guo and Prof. Christoph Brune on scientific machine learning and uncertainty quantification. I completed my PhD in 2022 at the Computational Science Lab, University of Amsterdam, under the supervision of Prof. Alfons Hoekstra. My PhD work mainly focused on surrogate modelling and uncertainty quantification for in-silico model ISR3D, as a part of Horizon 2020 project, VECMA.
Prior to my PhD, I studied Simulation Science at RWTH Aachen University, with a focus on numerical analysis, high-performance computing and computational fluid dynamics. Meanwhile, I worked as a Hiwi (research assistant) at the Institute of General Mechanics under the supervision of Dr. Franz Bamer on reduced-order modelling and finite element simulation. I earned my bachelor's degree in Engineering Mechanics at Tongji University in 2014.
Related documents
Education/Academic qualification
PhD, Computational Mathematics, University of Amsterdam
2018 → 2022
Master, Simulation Sciences, RWTH Aachen University
2015 → 2018
Bachelor, Engineering Mechanics, Tongji University
2010 → 2014
Research areas
- Scientific Machine Learning
- Uncertainty Quantification
Person Types
- Staff
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Collaborations and top research areas from the last five years
Projects
- 1 Active
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Towards Reliable and Scalable Gaussian Process Surrogate for Partial Differential Equations
Ye, D. (PI)
1/01/26 → 31/12/27
Project: Internal Research Project
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PDE-constrained Gaussian process surrogate modeling with uncertain data locations
Ye, D., Yan, W., Brune, C. & Guo, M., Dec 2025, In: Advanced Modeling and Simulation in Engineering Sciences. 12, 1, 33.Research output: Contribution to journal › Article › peer-review
Open Access2 Citations (Scopus) -
Towards Scientific Machine Learning for Granular Material Simulations: Challenges and Opportunities
Fransen, M., Fürst, A., Tunuguntla, D., Wilke, D. N., Alkin, B., Barreto, D., Brandstetter, J., Cabrera, M. A., Fan, X., Guo, M., Kieskamp, B., Kumar, K., Morrissey, J., Nuttall, J., Ooi, J., Orozco, L., Papanicolopulos, S. A., Qu, T., Schott, D. & Shuku, T. & 4 others, , 2025, (Accepted/In press) In: Archives of Computational Methods in Engineering.Research output: Contribution to journal › Review article › peer-review
Open Access5 Citations (Scopus) -
Data-driven reduced-order modelling for blood flow simulations with geometry-informed snapshots
Ye, D., Krzhizhanovskaya, V. & Hoekstra, A. G., 15 Jan 2024, In: Journal of Computational Physics. 497, 112639.Research output: Contribution to journal › Article › peer-review
Open Access17 Citations (Scopus) -
Gaussian process learning of nonlinear dynamics
Ye, D. & Guo, M., Nov 2024, In: Communications in Nonlinear Science and Numerical Simulation. 138, 108184.Research output: Contribution to journal › Article › peer-review
Open Access7 Citations (Scopus) -
Inverse uncertainty quantification of a mechanical model of arterial tissue with surrogate modelling
Kakhaia, S., Zun, P., Ye, D. & Krzhizhanovskaya, V., Oct 2023, In: Reliability Engineering and System Safety. 238, 109393.Research output: Contribution to journal › Article › peer-review
Open Access9 Citations (Scopus)